МОЛЕКУЛЯРНО-ГЕНЕТИЧЕСКИЕ ФАКТОРЫ РЕАЛИЗАЦИИ ПАТОГЕННОГО ПОТЕНЦИАЛА HELICOBACTERPYLORI: ПЕРСОНИФИЦИРОВАННЫЕ ТЕХНОЛОГИИ ОЦЕНКИ ПРОЯВЛЕНИЙ, ЛАБОРАТОРНОЙ ДИАГНОСТИКИ И ПРОГНОЗА
https://doi.org/10.51523/2708-6011.2018-15-1-3
Аннотация
Представлен аналитический обзор об особенностях технологий оценки патогенетического потенциала бактерии Helicobacterpylori - этиологического агента ряда заболеваний желудочно-кишечного тракта. Основной упор сделан на современные молекулярно-генетические технологии, позволяющие оценить не только патогенный потенциал бактерии, но и особенности микробиоты желудка и генотип инфицированного человека-хозяина.
Об авторе
Е. В. Воропаев
Учреждение образования «Гомельский государственный медицинский университет»
Беларусь
Беларусь
Список литературы
1. Akosua, A.A., Richard, O.A. / Journal of Pharmacy And Bioallied Sciences 2015 Jul-Sep; Vol. 7(3): P. 239-244. // Perspective: Does personalized medicine hold the future for medicine?
2. Asahi Momoyo / Momoyo Asahi [et al.] / Helicobacter pylori Caga Protein Can Be Tyrosine Phosphorylated in Gastric Epithelial Cells // Journal of Experimental Medicine 2000 Feb 21; Vol. 191(4): P. 593-602.
3. Bahnassy Abeer A. [et al.]: Cyclin A and cyclin D1 as significant colorectal cancer patients BMC Gastroenterology 2004, Vol. 4: P. 22.
4. Beltran-Anaya F.O. / F.O. Beltran-Anaya [et al.] BMC Gastroenterology 2014 Dec 24; Vol. 14: P. 223. // The EPIYA-ABCC motif pattern in CagA of Helicobacter pylori is associated with peptic ulcer and gastric cancer in Mexican population.
5. Bentley D. R. / D. R. Bentley [et al.] (2008).// Accurate whole human genome sequencing using reversible terminator chemistry.Nature Vol. 456P. 53-59
6. Boyanova L. / Role of Helicobacter pylori virulence factors for iron acquisition from gastric epithelial cells of the host and impact on bacterial colonization. Future Microbiology. 2011 Aug; Vol. 6(8): P.843-846.
7. Cheng-Yao Chen / Frontiers in Microbiology. 2014; Vol. 5: P. 305. // DNA polymerases drive DNA sequencing-by-synthesis technologies: both past and present.
8. D.M. Parkin, F. Bray, J. Ferlay, P. Pisani / Global cancer statistics 2002. // CA: A Cancer Journal for Clinicians Vol. 55 (2005) P. 74-108.
9. Delgado S. / S. Delgado [et al.] Microbiological survey of the human gastric ecosystem using culturing and pyrosequencing methods //Microbial Ecology 2013; Vol. 65:P. 763-772.
10. Dorak M.T. / Real Time PCR (BIOS Advanced Methods) // M.T. Dorak. - Taylor & Francis. - 2006. - 333 p.
11. F.P. Carter, T. Frankson, J. Pintard, B. Edgecombe / Seroprevalence of Helicobacter pylori infection in adults in the Bahamas // West Indian Medical Journal Vol. 60 (2011) P. 662- 665.
12. Fujimoto S. / S.Fujimoto [et al.] Helicobacter pylori BabA expression, gastric mucosal injury, and clinical outcome.// Clinical Gastroenterology and Hepatology 2007; Vol. 5: P. 49-58.
13. Gerald Karp / (2007).Cell and Molecular Biology: Concepts and Experiments. // New York: Wiley. pp.148, 165-170, 624-664.
14. Ginsburg, G.S., Willard, H.F. / Genomic and personalized medicine: Foundations and applications // Translational Research. 2009; Vol. 154(6): P. 277-287.
15. International Human Genome Sequencing Consortium / Initial sequencing and analysis of the human genome // Nature (London)2001; Vol. 409: P. 860-921.
16. J.M. Noto, R.M. Peek / Helicobacter pylori: an overview // Methods in Molecular Biology Vol. 921 (2012) P. 7-10.
17. J.R. Warren / Gastric pathology associated with Helicobacter pylori, Gastrointestinal Endoscopy Clinics of North America // 29 (2000) 705-751.
18. Kieleczawa J. / Sequencing of difficult DNA templates. In Kieleczawa J. (ed): // DNA Sequencing: Optimizing the Process and Analysis. Sudbury, MA: Jones and Bartlett, 2005:27-34.
19. Klymiuk I. / I. Klymiuk [et al.] The Human Gastric Microbiome Is Predicated upon Infection with Helicobacter pylori. // Frontiers in Microbiology. 2017 Dec 14; Vol. 8: P. 2508.
20. Kusters G. / G. Kusters [et al.] Pathogenesis of Helicobacter pylori Infection // Clinical Microbiology Reviews 2006 Jul; Vol. 19 (3): P. 449-490.
21. Linz B. / B. Linz [et al.] / An African origin for the intimate association between humans and Helicobacter pylori // Nature Vol. 445 (2007) P. 915-918.
22. Liu L. / L. Liu [et al.] 2012. / Comparison of next-generation sequencing systems //Journal of Biomedicine and Biotechnology Vol. 2012: Article ID 251364.
23. Lydia E. Wroblewski / E. Lydia Wroblewski [et al.] / Helicobacter pylori and Gastric Cancer: Factors That Modulate Disease Risk // Clinical Microbiology Reviews. 2010 Oct; 23(4): 713-739.
24. Makarenko E.V. / E.V. Makarenko [et al.] Multiple Helicobacter pylori as peculiar feature in Belarusian рatients with duodenal ulcer // Digestive Diseases and Sciences 2003 Vol. 48, № 9: P. 1879.
25. Malfertheiner P. / P. Malfertheiner [et al.] European Helicobacter and Microbiota Study Group and Consensus panel. / Gut. 2017 Jan; Vol. 66 (1): P. 6-30. Epub 2016 Oct 5. // Management of Helicobacter pylori infection-the Maastricht V/Florence Consensus Report.
26. Maxam A.M., Gilbert W. / A new method for sequencing DNA. // Proceedings of the National Academy of Sciences USA. 1977; Vol. 74: P. 560-564.
27. Mobley H.L.T., Mendz G.L., Hazell S.L. // Washington (DC): ASM Press; 2001. Helicobacter pylori: Physiology and Genetics.
28. Muller A. / Multistep activation of the Helicobacter pylori effector CagA // Journal Of Clinical Investigation Vol. 122 (2012) P. 1192-1195.
29. Mullis K.B. / The polymerase chain reaction in an anemic mode: how to avoid cold oligodeoxyribonuclear fusion. // PCR Methods and Applications1991 Aug; Vol. 1(1):P.1-4.
30. Nagini S. / Carcinoma of the stomach: A review of epidemiology, pathogenesis, molecular genetics and chemoprevention. // World Journal of Gastrointestinal Oncology. 2012; Vol. 4(7): P. 156-169.
31. Nardone G., Compare D. / The human gastric microbiota: Is it time to rethink the pathogenesis of stomach diseases? // United European Gastroenterology Journal. 2015 Jun; Vol. 3(3):P. 255-260.
32. Nigg, E. A. Genome Instability in Cancer Development (Advances in Experimental Medicine and Biology) / E. A. Nigg. - Springer. - 2006. - 511 p.
33. Pincock S. / Nobel Prize winners Robin Warren and Barry Marshall. // Lancet. 2005 Oct P. 22-28.
34. Poretsky R. [et al.] / (2014) Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics // PLoS ONE Vol. 9, e93827 doi:10.1371/ journal.pone.0093827.
35. Riny Janssen / Riny Janssen [et al.] Host-Pathogen Interactions in Campylobacter Infections: The Host Perspective // Clinical Microbiology Reviews. 2008 Jul; Vol. 21(3): P. 505-518.
36. Roos S., Engstrand L., Jonsson H. / Lactobacillus gastricus sp. nov., Lactobacillus antri sp. nov., Lactobacillus kalixensis sp. nov. and Lactobacillus ultunensis sp. nov., isolated from human stomach mucosa.// International Journal of Systematic and Evolutionary Microbiology.2005; Vol. 55: P. 77-82.
37. Sanger F. / Determination of nucleotide sequences in DNA. // Bioscience Reports. 1981 Jan; Vol. 1(1): P. 3-18.
38. Schulz A. / Molecular Biology of Human Cancers // A. Schulz - Springer. - 2005. - 508 p.
39. Sheh Alexander, G. Fox. James / The role of the gastrointestinal microbiome in Helicobacter pylori pathogenesis // Gut Microbes. 2013 Nov 1; Vol. 4(6): P. 505-531.
40. Smith L.M., [et al.] / L.M. Smith [et al.] Fluorescence detection in automated DNA sequence analysis. // Nature. 1986; Vol. 321: P. 674-679.
41. Takahiro Uotani, David Y. Graham / Diagnosis of Helicobacter pylori using the rapid urease test /Annals of Translational Medicine 2015 Jan; 3(1): 9.
42. Van Doorn L.J. / van Doorn L.J. [et al.] Clinical relevance of the cagA, vacA, and iceA status of Helicobacter pylori. // Gastroenterology. 1998; Vol. 115: P. 58-66.
43. Van Nhieu G.T. / G.T. Van Nhieu [et al.] Helicobacter pylori type IV secretion apparatus exploits b1 integrin in a novel RGD-independent manner // PLOS Pathogens Vol. 5 (2009) e1000684.
44. Venter J.C. / J.C. Venter [et al.] The sequence of the human genome // Science.2001; Vol. 291: P. 1304-1351.
45. Venter J.C., Beard A. / J. Craig Venter the biologist who led the for-profit effort to sequence the human genome shares his thoughts on commercializing science. // Harvard Business Review. 2014 Sep; Vol. 92 (9): P. 132.
46. Wang A.Y., Peura D.A. / The prevalence and incidence of Helicobacter pylori associated peptic ulcer disease and upper gastrointestinal bleeding throughout the world // Gastrointestinal Endoscopy Clinics of North America Vol. 21 (2011): P. 613-635.
47. Wang Li-Li / Li-Li Wang [et al.] / Participation of microbiota in the development of gastric cancer // World Journal of Gastroenterology // 2014 May 7; Vol. 20 (17): P. 4948-4952.
48. Xu J., Czinn S.J., Blanchard T.G. / Maintenance of Helicobacter pylori cultures in agar stabs. // Helicobacter. 2010; Vol. 15: P. 477-480.
49. Yoshio Yamaoka,Muhammad Miftahussurur / Expert Review of Gastroenterology and Hepatology // Helicobacter pylorivirulence genes and host genetic polymorphisms as risk factors for peptic ulcer disease 2015; Vol. 9 (12): P. 1535-1547.
50. Zhang Yang / Yang Zhang [et al.] / Genome-wide DNA methylation profiles altered by Helicobacter pylori in gastric mucosa and blood leukocyte DNA // Oncotarget 2016 Jun Vol. 14; 7(24): P. 37132-37144.
Рецензия
Для цитирования:
Воропаев Е.В. МОЛЕКУЛЯРНО-ГЕНЕТИЧЕСКИЕ ФАКТОРЫ РЕАЛИЗАЦИИ ПАТОГЕННОГО ПОТЕНЦИАЛА HELICOBACTERPYLORI: ПЕРСОНИФИЦИРОВАННЫЕ ТЕХНОЛОГИИ ОЦЕНКИ ПРОЯВЛЕНИЙ, ЛАБОРАТОРНОЙ ДИАГНОСТИКИ И ПРОГНОЗА. Проблемы здоровья и экологии. 2018;(1):15-20. https://doi.org/10.51523/2708-6011.2018-15-1-3
For citation:
Voropaev E.V. MOLECULAR AND GENETIC FACTORS FOR REALIZATION OF THE PATHOGENIC POTENTIAL OF HELICOBACTER PYLORI: PERSONIFIED TECHNIQUES FOR ASSESSMENT OF MANIFESTATIONS, LABORATORY DIAGNOSIS AND PROGNOSIS. Health and Ecology Issues. 2018;(1):15-20. (In Russ.) https://doi.org/10.51523/2708-6011.2018-15-1-3
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